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1997

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February

  

Reviews of topical problems


Disordered polymers


Institute for Biochemical Physics, Russian Academy of Sciences, ul. Kosygina 4, Moscow, 119334, Russian Federation

A single polymer macromolecule is considered with disorder types such as branches, knots, and heterogeneous sequences of chemical units. In all cases, simple theoretical approaches are employed to gain useful physical insights. For branched polymers, a simple Flory-type theory is described by means of which the difference between the universality classes for molecules with quenched and annealed branches is demonstrated. For knots, another Flory-type theory is suggested to describe the swelling and/or collapse of a quenched topology ring or the size distribution for the annealed case. To consider heteropolymers, the Random Energy Model borrowed from the spin glass theory is systematically employed. This allows a simple yet rigorous description of both the freezing transition of a random sequence globule and the use of the canonical ensemble for designing sequences with energy-optimized ground state conformation. Along with the analytical theory, computer tests for the freezing and design processes are discussed. The sequence design scheme is shown to yield a specific prediction concerning the character of correlations in protein sequences. Statistical tests confirming this prediction are described.

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Fulltext is also available at DOI: 10.1070/PU1997v040n02ABEH000192
PACS: 36.20.−r, 64.70.−p, 87.10.+e, 87.10.-v (all)
DOI: 10.1070/PU1997v040n02ABEH000192
URL: https://ufn.ru/en/articles/1997/2/b/
A1997WT28000002
Citation: Grosberg A Yu "Disordered polymers" Phys. Usp. 40 125–158 (1997)
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Оригинал: Гросберг А Ю «Неупорядоченные полимеры» УФН 167 129–166 (1997); DOI: 10.3367/UFNr.0167.199702b.0129

References (157) Cited by (36) Similar articles (20) ↓

  1. I.M. Lifshits, A.Yu. Grosberg, A.R. Khokhlov “Volume interactions in the statistical physics of a polymer macromoleculeSov. Phys. Usp. 22 123–142 (1979)
  2. V.S. Dotsenko “Physics of the spin-glass statePhys. Usp. 36 (6) 455–485 (1993)
  3. A.I. Olemskoi, I.V. Koplyk “The theory of spatiotemporal evolution of nonequilibrium thermodynamic systemsPhys. Usp. 38 1061–1097 (1995)
  4. M.D. Frank-Kamenetskii, A.V. Vologodskii “Topological aspects of the physics of polymers: The theory and its biophysical applicationsSov. Phys. Usp. 24 679–696 (1981)
  5. A.A. Ovchinnikov, I.I. Ukrainskii, G.V. Kventsel’ “Theory of one-dimensional mott semiconductors and the electronic structure of long molecules having conjugated bondsSov. Phys. Usp. 15 575–591 (1973)
  6. G.A. Martynov “The problem of phase transitions in statistical mechanicsPhys. Usp. 42 517–543 (1999)
  7. A.N. Semenov, A.R. Khokhlov “Statistical physics of liquid-crystalline polymersSov. Phys. Usp. 31 988–1014 (1988)
  8. B.M. Barbashov, V.V. Nesterenko “Superstrings: a new approach to a unified theory of fundamental interactionsSov. Phys. Usp. 29 1077–1096 (1986)
  9. V.V. Lobzin, V.R. Chechetkin “Order and correlations in genomic DNA sequences. The spectral approachPhys. Usp. 43 55–78 (2000)
  10. N.M. Astaf’eva “Wavelet analysis: basic theory and some applicationsPhys. Usp. 39 1085–1108 (1996)
  11. H.D. Abarbanel, M.I. Rabinovich et alSynchronisation in neural networksPhys. Usp. 39 337–362 (1996)
  12. V.N. Pokrovskii “Low-frequency dynamics of dilute solutions of linear polymersPhys. Usp. 37 375–391 (1994)
  13. V.N. Binhi, A.V. Savin “Effects of weak magnetic fields on biological systems: physical aspectsPhys. Usp. 46 259–291 (2003)
  14. M.A. Anisimov, E.E. Gorodetskii, V.M. Zaprudskii “Phase transitions with coupled order parametersSov. Phys. Usp. 24 57–75 (1981)
  15. A.I. Olemskoi “Theory of stochastic systems with singular multiplicative noisePhys. Usp. 41 269–301 (1998)
  16. A.E. Grishchenko, A.N. Cherkasov “Orientational order in polymer surface layersPhys. Usp. 40 257–272 (1997)
  17. A.V. Savin, L.I. Manevich et alNonlinear dynamics of zigzag molecular chainsPhys. Usp. 42 245–260 (1999)
  18. V.A. Kovarskii “Quantum processes in biological molecules. Enzyme catalysisPhys. Usp. 42 797–815 (1999)
  19. Yu.F. Krupyanskii, V.I. Gol’danskii “Dynamical properties and energy landscape of simple globular proteinsPhys. Usp. 45 1131–1151 (2002)
  20. B.N. Belintsev “Dissipative structures and the problem of biological pattern formationSov. Phys. Usp. 26 775–800 (1983)

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