RSS feeds
РусскийEnglish
Issue 4, 2024
Volume year page
Issues Authors PACS Subscription For authors

Issues

 / 

2021

 / 

September

←  →

Reviews of topical problems


Multiplicity of 're-entrant' cholesteric structures in DNA liquid-crystalline dispersions

†  a,  a,  a,  b,  c
a Engelhardt Institute of Molecular Biology Russian Academy of Sciences, Vavilov str. 32, Moscow, 119991, Russian Federation
b National Research Centre ‘Kurchatov Institute’, pl. akad. Kurchatova 1, Moscow, 123182, Russian Federation
c L.D. Landau Institute for Theoretical Physics, Russian Academy of Sciences, Chernogolovka, Moscow Region, Russian Federation

The results of investigations of the properties of liquid-crystalline dispersions of DNA molecules formed in their phase exclusion are systematized. The influence of temperature and osmotic pressure on the structure of these molecules has been elucidated in the framework of the concept of 'quasinematc' layers of orientationally ordered DNA molecules in dispersed particles. A new hexagonal → 're-entrant' cholesteric packing phase transition of DNA molecules discovered by the authors is described, taking into account the generalized Lindemann criterion. The multiplicity of the 're-entrant' phases and their structure are shown to depend on the characteristics of DNA and water-polymer solutions.

Fulltext pdf (944 KB)
Fulltext is also available at DOI: 10.3367/UFNe.2020.09.038843
Keywords: DNA, liquid-crystalline dispersions, circular dichroism, textures, intercalators, `re-entrant' phases, Lindemann criterion
PACS: 61.30.Eb, 64.70.M−, 82.70.−y (all)
DOI: 10.3367/UFNe.2020.09.038843
URL: https://ufn.ru/en/articles/2021/9/d/
000722209600004
2-s2.0-85120777969
Citation: Yevdokimov Yu M, Skuridin S G, Salyanov V I, Semenov S V, Kats E I "Multiplicity of 're-entrant' cholesteric structures in DNA liquid-crystalline dispersions" Phys. Usp. 64 947–963 (2021)
BibTexBibNote ® (generic)BibNote ® (RIS)MedlineRefWorks

Received: 23rd, June 2020, revised: 22nd, July 2020, 28th, September 2020

Оригинал: Евдокимов Ю М, Скуридин С Г, Салянов В И, Семёнов С В, Кац Е И «Множественность "возвратных" холестерических структур в жидкокристаллических дисперсиях ДНК» УФН 191 999–1015 (2021); DOI: 10.3367/UFNr.2020.09.038843

References (126) ↓ Cited by (1) Similar articles (20)

  1. Robinson C Tetrahedron 13 219 (1961)
  2. Luzzati V, Nicolaïeff A J. Mol. Biol. 7 142 (1963)
  3. Potaman V N et al Nucleic Acids Res. 9 55 (1981)
  4. Brandes R, Kearns D R Biochemistry 25 5890 (1986)
  5. Strzelecka T E, Rill R L J. Am. Chem. Soc. 109 4513 (1987)
  6. Livolant F et al Nature 339 724 (1989)
  7. Wissenburg P et al Macromolecules 28 2315 (1995)
  8. Parsegian V A et al Meth. Enzymology 127 400 (1986)
  9. Todd B A et al Biophys. J. 94 4775 (2008)
  10. Livolant F, Bouligand Y J. Phys. France 47 1813 (1986)
  11. Yevdokimov Yu M, Skuridin S G, Salyanov V I Liq. Cryst. 3 1443 (1988)
  12. Singh S Phys. Rep. 324 107 (2000)
  13. Merchant K, Rill R L Macromolecules 27 2365 (1994)
  14. Kassapidou K et al Biopolymers 46 31 (1998)
  15. Rill R L et al Chromosoma 98 280 (1989)
  16. Livolant F J. Mol. Biol. 218 165 (1991)
  17. Leforestier A, Livolant F Biol. Cell 71 115 (1991)
  18. Durand D, Doucet J, Livolant F J. Phys. II France 2 1769 (1992)
  19. Leforestier A, Livolant F Biophys. J. 65 56 (1993)
  20. Livolant F, Leforestier A Prog. Polym. Sci. 21 1115 (1996)
  21. Mitov M Soft Matter 13 4176 (2017)
  22. Lerman L S Proc. Natl. Acad. Sci. USA 68 1886 (1971)
  23. Evdokimov Yu M et al FEBS Lett. 23 180 (1972)
  24. Akimenko N M et al FEBS Lett. 38 61 (1973)
  25. Maniatis T, Venable J H, Lerman L S J. Mol. Biol. 84 37 (1974)
  26. Lerman L S Cold Spring Harbor Symp. Quant. Biol. 38 59 (1974)
  27. Poglazov B F, Tikhonenko A S, Engel’gardt V A Dokl. Akad. Nauk SSSR 143 1233 (1962); Poglazov B F, Tikhonenko A S, Engelhardt V A Proc. USSR Acad. Sci. 145 450 (1962)
  28. Laemmli U K Proc. Natl. Acad. Sci. USA 72 4288 (1975)
  29. Hud N V, Vilfan I D Annu. Rev. Biophys. Biomol. Struct. 34 295 (2005)
  30. Hoang T X et al J. Chem. Phys. 140 064902 (2014)
  31. Yevdokimov Yu M, Skuridin S G, Lortkipanidze G B Liq. Cryst. 12 1 (1992)
  32. Goldar A, Thomson H, Seddon J M J. Phys. Condens. Matter 20 035102 (2007)
  33. Biswas N et al Chem. Phys. Lett. 539-540 157 (2012)
  34. Yevdokimov Yu et al Crystals 9 162 (2019)
  35. Livolant F Physica A 176 117 (1991)
  36. Evdokimov Yu M, Kompanets O N Usp. Fiz. Nauk 184 665 (2014); Yevdokimov Yu M, Kompanets O N Phys. Usp. 57 615 (2014)
  37. Adamczyk A Mol. Cryst. Liq. Cryst. Incorp. Nonlin. Opt. 170 53 (1989)
  38. Aranson I S Usp. Fiz. Nauk 183 87 (2013); Aranson I S Phys. Usp. 56 79 (2013)
  39. Evdokimov Yu M i dr DAN 467 556 (2016); Yevdokimov Yu M et al Dokl. Phys. Chem. 467 53 (2016)
  40. Yevdokimov Yu M et al J. Biol. Phys. 43 45 (2017)
  41. Evdokimov Yu M i dr Zhidkokristallicheskie Dispersii i Nanokonstruktsii DNK (M.: Radiotekhnika, 2008); Yevdokimov Yu M et al DNA Liquid-Crystalline Dispersions And Nanoconstructions (Boca Raton, FL: CRC Press. Taylor and Francis Group, 2011)
  42. Yevdolimov Yu M et al Structural DNA Nanotechnology: Liquid-Crystalline Approach (Biotechnology Vol. 4 Applied Synthetic Biology, Ed. J N Govil) (Houston, TX: Studium Press, 2014) p. 327
  43. Evdokimov Yu M i dr Texnol. Zhivyx Cictem 10 (1) 20 (2013)
  44. Strey H H, Parsegian V A, Podgornik R Phys. Rev. Lett. 78 895 (1997)
  45. Leonard M et al Polymer 42 5823 (2001)
  46. Cherstvy A G J. Phys. Chem. B 112 12585 (2008)
  47. Hoang T X et al J. Chem. Phys. 140 064902 (2014)
  48. Podgornik R et al Biophys. Chem. 57 111 (1995)
  49. Odijk T Biophys. Chem. 73 23 (1998)
  50. Stanley C B, Hong H, Strey H H Biophys. J. 89 2552 (2005)
  51. Yasar S et al Sci. Rep. 4 6877 (2014)
  52. Goldar A, Thomson H, Seddon J M J. Phys. Condens. Matter 20 035102 (2007)
  53. Ubbink J, Odijk T Biophys. J. 68 54 (1995)
  54. Grasso D et al Liq. Cryst. 9 299 (1991)
  55. Grasso D, Gabriele-Campisi R, La Rosa C Thermochim. Acta 199 239 (1992)
  56. Skuridin S et al Liq. Cryst. 3 51 (1988)
  57. Durand D, Doucet J, Livolant F J. Phys. II France 2 1769 (1992)
  58. Gautier A et al J. Ultrastruct. Mol. Struct. Res. 97 10 (1986)
  59. Barry E et al Phys. Rev. Lett. 96 018305 (2006)
  60. Chilaya G S, Lisetskii L N Usp. Fiz. Nauk 134 279 (1981); Chilaya G S, Lisetskii L N Sov. Phys. Usp. 24 496 (1981)
  61. Chandrasekhar S Liquid Crystals 2nd ed. (Cambridge: Cambridge Univ. Press, 1992)
  62. Kornyshev A A, Leikin S, Malinin S V Eur. Phys. J. E 7 83 (2002)
  63. Blinov L M Structure And Properties Of Liquid Crystals (Dordrecht: Springer, 2010)
  64. Azároff L V Mol. Cryst. Liq. Cryst. 60 73 (1980)
  65. Odijk T Biophys. Chem. 46 69 (1993)
  66. Odijk T Europhys. Lett. 24 177 (1993)
  67. Podgornik R, Strey H H, Parsegian V A Curr. Opin. Colloid Interface Sci. 3 534 (1998)
  68. Vainshtein B K Difraktsiya Rentgenovykh Luchei na Tsepnykh Molekulakh (M.: Izd-vo AN SSSR, 1963)
  69. Vainshtein B K Diffraction Of X-Rays By Chain Molecules (Amsterdam: Elsevier Publ. Co., 1966)
  70. Kornyshev A A et al Phys. Rev. Lett. 95 148102 (2005)
  71. Kamien R D, Selinger J V J. Phys. Condens. Matter 13 R1 (2001)
  72. Lee D J, Wynveen A, Kornyshev A A Phys. Rev. E 70 051913 (2004)
  73. Harris A B, Kamien R D, Lubensky T C Phys. Rev. Lett. 78 1476 (1997)
  74. Tombolato F, Ferrarini A J. Chem. Phys. 122 054908 (2005)
  75. Saeva F D, Wysocki J J J. Am. Chem. Soc. 93 5928 (1971)
  76. Sackman E, Voss J Chem. Phys. Lett. 14 528 (1972)
  77. Saeva F D, Sharpe P E, Olin G R J. Am. Chem. Soc. 95 7656 (1973)
  78. Saeva F D Liquid Crystals And Ordered Fluids Vol. 2 (Eds J F Johnson, R S Porter) (New York: Plenum Press, 1974) p. 581
  79. Holzwarth G, Holzwarth N A W J. Opt. Soc. Am. 63 324 (1973)
  80. Nordén B Appl. Spectrosc. Rev. 14 157 (1978)
  81. Spada G P, Brigidi P, Gottarelli G J. Chem. Soc. Chem. Commun. 14 953 (1988)
  82. Maestre M F, Reich C Biochemistry 19 5214 (1980)
  83. Livolant F, Maestre M F Biochemistry 27 3056 (1988)
  84. Livolant F Eur. J. Cell Biol. 33 300 (1984)
  85. Cemenov C V, Evdokimov Yu M Biofizika 60 242 (2015); Semenov S V, Yevdokimov Yu M Biophysics 60 188 (2015)
  86. Yevdokimov Yu M et al Liq. Cryst. Their Appl. 18 64 (2018)
  87. Belyakov V A et al Liq. Cryst. 20 777 (1996)
  88. Yevdokimov Yu M et al The CD Spectra Of Double-Stranded DNA Liquid-Crystalline Dispersions (New York: Nova Science, 2011)
  89. Brunner W C, Maestre M F Biopolymers 13 345 (1974)
  90. Sonin A S Vvedenie v Fiziku Zhidkikh Kristallov (M.: Nauka, 1983)
  91. Sundaresan N et al Macromol. Biosci. 6 27 (2006)
  92. Evdokimov Yu M i dr Optika Spektrosk. 123 64 (2017); Yevdokimov Yu M et al Opt. Spectrosc. 123 56 (2017)
  93. Yevdokimov Yu M et al Chem. Phys. Lett. 707 154 (2018)
  94. Yevdokimov Yu M et al Chem. Phys. Lett. 717 59 (2019)
  95. Yevdokimov Yu et al Crystals 9 162 (2019)
  96. Giannini G Med. Chem. Rev. Online 1 47 (2004)
  97. Marco D, Arcamone F, Zunino Mechanism Of Action Of Antimicrobial And Antitumor Agents (Antibiotics) Vol. 3 (Eds J W Corcoran et al) (Berlin: Springer-Verlag, 1975) p. 101
  98. Neidle S, Taylor G Biochim. Biophys. Acta 479 450 (1977)
  99. Lober G et al Studia Biophys. 71 203 (1978)
  100. Gabbay E J et al Biochemistry 15 2062 (1976)
  101. Patel D J, Canuel L L Eur. J. Biochem. 90 274 (1978)
  102. Calendi E et al Biochem. Biophys. Acta 103 25 (1965)
  103. Triebel H et al Stud. Biophys. 81 79 (1980)
  104. Reinert K E Nucleic Acids Res. 11 3411 (1983)
  105. Fritzche H et al Biochemistry 21 3940 (1982)
  106. Ward D C, Reich E, Goldberg I Science 149 1259 (1965)
  107. Barthalemey-Clavay V, Maurizot J-C, Sicard P J Biochimie 55 859 (1973)
  108. Plumbridge T W, Aarons L J, Brown J R J. Pharm. Pharmacol. 30 69 (1978)
  109. Blake A, Peacocke A R Biopolymers 6 1225 (1968)
  110. Plumbridge T W, Brown J R Biochim. Biophys. Acta (BBA) Nucleic Acids Protein Synth. 479 441 (1977)
  111. Doscočil J, Frič I FEBS Lett. 37 55 (1973)
  112. Plumbridge T W, Brown J R Biochim. Biophys. Acta (BBA) Nucleic Acids Protein Synth. 563 181 (1979)
  113. Zakharov M A i dr Biofizika 50 834 (2005); Zakharov M A et al Biophysics 50 721 (2005)
  114. Lindemann F A Phys. Z. 14 609 (1910)
  115. Dash J G Rev. Mod. Phys. 71 1737 (1999)
  116. Buchenau U, Zorn R, Ramos M A Phys. Rev. E 90 042312 (2014)
  117. Guerra R E Phys. Rev. Lett. 124 218001 (2020)
  118. Vopson M M, Rogers N, Hepburn I arXiv:2005.12912
  119. Khokhlov A R, Semenov A N Physica A 108 546 (1981)
  120. Selinger J V, Bruinsma R F Phys. Rev. A 43 2922 (1991)
  121. Hansen J P, McDonald I R Theory Of Simple Liquids 1st ed. (London: Academic Press, 1976)
  122. Bedanov V M, Gadiyak G V, Lozovik Yu E Phys. Lett. A 109 289 (1985)
  123. Lawson A C Philos. Mag. 89 1757 (2009)
  124. Guardiola R, Navarro J J. Phys. Chem. A 115 6843 (2011)
  125. Kornyshev A A et al Rev. Mod. Phys. 79 943 (2007)
  126. Evdokimov Yu M i dr Biofizika 61 421 (2016); Yevdokimov Yu M et al Biophysics 61 351 (2016)
© 1918–2024 Uspekhi Fizicheskikh Nauk
Email: ufn@ufn.ru Editorial office contacts About the journal Terms and conditions